EnhancerDB
  1. Home
  2. SNP
  3. rs187125877[chr16:88821881]
Enhancers that have rs187125877[chr16:88821881]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs187125877[chr16:88821881]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88821879 88821888 SNAI2 JASPAR yes 12300111
chr16 88821880 88821885 USF2 TRANSFAC yes 12300112
Genes associated with rs187125877[chr16:88821881], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More