EnhancerDB
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  3. rs1871339[chr17:41491410]
Enhancers that have rs1871339[chr17:41491410]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41479046 41498765 enh17167
Brain (SK-N-MC) Astrocyte Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs1871339[chr17:41491410]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41491408 41491412 NFE TRANSFAC yes 54344066
Genes associated with rs1871339[chr17:41491410], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 41196312 41277500 - BRCA1 ENSG00000012048.15 41277500 213910 Lung 0.0568779 15893