EnhancerDB
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  3. rs187164972[chr1:229353105]
Enhancers that have rs187164972[chr1:229353105]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229351665 229369695 enh12764
Liver Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs187164972[chr1:229353105]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229353099 229353109 HOXC10 JASPAR yes 35975509
chr1 229353100 229353109 CDX1 JASPAR yes 35975510
chr1 229353100 229353111 CDX2 JASPAR yes 35975511
Genes associated with rs187164972[chr1:229353105], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More