EnhancerDB
  1. Home
  2. SNP
  3. rs187312489[chr5:79490889]
Enhancers that have rs187312489[chr5:79490889]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 79474525 79496555 enh22393
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs187312489[chr5:79490889]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 79490878 79490891 NFKB1 JASPAR yes 63704848
chr5 79490883 79490894 USF1 JASPAR yes 63704850
chr5 79490883 79490894 USF2 JASPAR yes 63704851
chr5 79490884 79490894 SREBF2 JASPAR yes 63704852
chr5 79490886 79490891 USF2 TRANSFAC yes 63704853
chr5 79490889 79490902 NR2F1 JASPAR yes 63704854
Genes associated with rs187312489[chr5:79490889], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More