EnhancerDB
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  3. rs187354656[chr12:46831699]
Enhancers that have rs187354656[chr12:46831699]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46820955 46858735 enh14676
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs187354656[chr12:46831699]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46830532 46831734 TCF7L2 GTRD no Colon (HCT116) 21541618
chr12 46830845 46832062 TCF7L2 GTRD no Colon (HCT116) 21541620
chr12 46831162 46831896 TCF7L2 GTRD no Colon (HCT116) 21541622
chr12 46831281 46831785 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541625
chr12 46831304 46832763 ZBTB33 GTRD no Brain (SK-N-SH) 108027317
chr12 46831368 46831990 TCF7L2 GTRD no Colon (HCT116) 21541628
chr12 46831385 46832043 ZNF143 GTRD no Epithelial (MCF-7) 21541629
chr12 46831695 46831699 LFA1 TRANSFAC yes 120620364
Genes associated with rs187354656[chr12:46831699], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More