EnhancerDB
  1. Home
  2. SNP
  3. rs187426890[chr15:42214592]
Enhancers that have rs187426890[chr15:42214592]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs187426890[chr15:42214592]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42214578 42214599 IRF1 JASPAR yes 23005522
chr15 42214580 42214600 RREB1 JASPAR yes 23005523
chr15 42214581 42214595 IRF7 JASPAR yes 23005524
chr15 42214582 42214597 STAT2 JASPAR yes 23005525
chr15 42214583 42214595 IRF1 JASPAR yes 23005526
chr15 42214583 42214598 FOXP1 JASPAR yes 23005527
chr15 42214583 42214604 IRF1 JASPAR yes 23005528
chr15 42214585 42214605 RREB1 JASPAR yes 23005529
chr15 42214588 42214600 IRF1 JASPAR yes 23005530
chr15 42214588 42214603 FOXP1 JASPAR yes 23005531
chr15 42214588 42214609 IRF1 JASPAR yes 23005532
chr15 42214590 42214610 RREB1 JASPAR yes 23005533
Genes associated with rs187426890[chr15:42214592], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More