EnhancerDB
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  3. rs187465473[chr1:226890876]
Enhancers that have rs187465473[chr1:226890876]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 226890865 226891416 vista5383
VISTA
Transcript factors that have rs187465473[chr1:226890876]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226890747 226891187 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21387234
chr1 226890747 226891187 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107876274
chr1 226890795 226891625 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21387235
chr1 226890795 226891625 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107876275
chr1 226890795 226891803 POLR2A UCSC Txn Factor no Conserved 107876276
chr1 226890832 226891502 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21387236
chr1 226890832 226891502 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107876277
chr1 226890852 226891177 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21387237
chr1 226890852 226891177 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107876278
chr1 226890861 226890876 FOXP1 JASPAR yes 35835419
chr1 226890861 226890876 FOXP1 JASPAR yes 118472550
chr1 226890861 226890882 IRF1 JASPAR yes 35835420
chr1 226890861 226890882 IRF1 JASPAR yes 118472551
chr1 226890865 226890879 STAT1 JASPAR yes 35835422
chr1 226890865 226890879 STAT1 JASPAR yes 118472553
chr1 226890865 226890880 PRDM1 JASPAR yes 35835423
chr1 226890865 226890880 STAT2 JASPAR yes 35835424
chr1 226890865 226890880 PRDM1 JASPAR yes 118472554
chr1 226890865 226890880 STAT2 JASPAR yes 118472555
chr1 226890867 226890888 IRF1 JASPAR yes 35835425
chr1 226890867 226890888 IRF1 JASPAR yes 118472556
Genes associated with rs187465473[chr1:226890876], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More