EnhancerDB
  1. Home
  2. SNP
  3. rs187554447[chr17:56001273]
Enhancers that have rs187554447[chr17:56001273]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs187554447[chr17:56001273]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56001269 56001276 NKX3-1 JASPAR yes 54999922
chr17 56001273 56001276 MYB TRANSFAC yes 54999923
chr17 56001273 56001282 SOX9 JASPAR yes 54999924
Genes associated with rs187554447[chr17:56001273], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More