EnhancerDB
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  3. rs1876840[chr1:229368472]
Enhancers that have rs1876840[chr1:229368472]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229351665 229369695 enh12764
Liver Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs1876840[chr1:229368472]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229368447 229368791 ZNF274 GTRD no Liver (HepG2) 21390882
chr1 229368464 229368472 LEF1 TRANSFAC yes 35978005
chr1 229368467 229368488 ZNF263 JASPAR yes 35978006
chr1 229368470 229368476 PEA3 TRANSFAC yes 35978007
Genes associated with rs1876840[chr1:229368472], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More