EnhancerDB
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  3. rs187758173[chr5:172226875]
Enhancers that have rs187758173[chr5:172226875]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172200585 172237795 enh22816
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr5 172226784 172227709 vista50176
VISTA
Transcript factors that have rs187758173[chr5:172226875]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172226870 172226891 IRF1 JASPAR yes 67828780
chr5 172226870 172226891 IRF1 JASPAR yes 70763502
chr5 172226874 172226889 PRDM1 JASPAR yes 67828781
chr5 172226874 172226889 PRDM1 JASPAR yes 70763503
chr5 172226874 172226894 PPARG JASPAR yes 67828782
chr5 172226874 172226894 PPARG JASPAR yes 70763504
Genes associated with rs187758173[chr5:172226875], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More