EnhancerDB
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  3. rs187848754[chr16:88827624]
Enhancers that have rs187848754[chr16:88827624]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs187848754[chr16:88827624]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88823651 88829212 TCF7L2 GTRD no Colon (HCT116) 21736871
chr16 88823651 88829212 TCF7L2 GTRD no Colon (HCT116) 108223302
chr16 88825532 88829851 POLR2A UCSC Txn Factor no Conserved 108223304
chr16 88826534 88827656 TCF7L2 GTRD no Colon (HCT116) 21736879
chr16 88826534 88827656 TCF7L2 GTRD no Colon (HCT116) 108223312
Genes associated with rs187848754[chr16:88827624], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More