EnhancerDB
  1. Home
  2. SNP
  3. rs187853067[chr15:42224638]
Enhancers that have rs187853067[chr15:42224638]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs187853067[chr15:42224638]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42224630 42224644 GLIS2 JASPAR yes 23006916
chr15 42224633 42224648 ZIC3 JASPAR yes 23006917
chr15 42224634 42224648 ZIC1 JASPAR yes 23006918
Genes associated with rs187853067[chr15:42224638], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More