EnhancerDB
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  3. rs187869798[chr5:172310755]
Enhancers that have rs187869798[chr5:172310755]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr5 172310587 172310757 vista50191
VISTA
Transcript factors that have rs187869798[chr5:172310755]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172310744 172310758 PLAG1 JASPAR yes 67839137
chr5 172310744 172310758 PLAG1 JASPAR yes 70764528
chr5 172310751 172310756 SP1 TRANSFAC yes 67839138
chr5 172310751 172310756 SP1 TRANSFAC yes 70764529
chr5 172310752 172310757 SP1 TRANSFAC yes 67839139
chr5 172310752 172310757 SP1 TRANSFAC yes 70764530
chr5 172310752 172310761 THAP1 JASPAR yes 67839140
chr5 172310752 172310761 THAP1 JASPAR yes 70764531
chr5 172310755 172310759 LFA1 TRANSFAC yes 67839141
chr5 172310755 172310759 LFA1 TRANSFAC yes 70764532
Genes associated with rs187869798[chr5:172310755], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More