EnhancerDB
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  3. rs187872220[chr1:172322322]
Enhancers that have rs187872220[chr1:172322322]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172318125 172332422 enh12370
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs187872220[chr1:172322322]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172322312 172322326 BATF3 JASPAR yes 33124907
chr1 172322316 172322324 MEIS2 JASPAR yes 33124908
chr1 172322316 172322324 MEIS3 JASPAR yes 33124909
chr1 172322321 172322325 YY1 TRANSFAC yes 33124911
Genes associated with rs187872220[chr1:172322322], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More