EnhancerDB
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  3. rs187920729[chr17:28042340]
Enhancers that have rs187920729[chr17:28042340]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 28029886 28064015 enh4330
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs187920729[chr17:28042340]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 28040466 28043718 ZNF274 GTRD no Bone Marrow (K562) 21749411
chr17 28040466 28043718 ZNF274 GTRD no Bone Marrow (K562) 108247636
chr17 28040466 28043718 ZNF274 GTRD no Bone Marrow (K562) 108247637
chr17 28040508 28043169 ZNF274 GTRD no Bone Marrow (K562) 21749412
chr17 28040508 28043169 ZNF274 GTRD no Bone Marrow (K562) 108247640
chr17 28040508 28043169 ZNF274 GTRD no Bone Marrow (K562) 108247641
chr17 28040565 28044290 ZNF274 GTRD no Bone Marrow (K562) 21749416
chr17 28040565 28044290 ZNF274 GTRD no Bone Marrow (K562) 108247654
chr17 28040565 28044290 ZNF274 GTRD no Bone Marrow (K562) 108247655
chr17 28040583 28042657 ZBTB33 GTRD no Lung (A549) 108247658
chr17 28040583 28042657 ZBTB33 GTRD no Lung (A549) 108247659
chr17 28040723 28042360 ZBTB33 GTRD no Lung (A549) 108247685
chr17 28040723 28042360 ZBTB33 GTRD no Lung (A549) 108247686
chr17 28040743 28042404 ZBTB33 GTRD no Lung (A549) 108247687
chr17 28040743 28042404 ZBTB33 GTRD no Lung (A549) 108247688
chr17 28040783 28043121 ZNF274 GTRD no Blood (GM12878) 21749426
chr17 28040783 28043121 ZNF274 GTRD no Blood (GM12878) 108247697
chr17 28040783 28043121 ZNF274 GTRD no Blood (GM12878) 108247698
chr17 28040931 28042400 TCF7L2 GTRD no Colon (HCT116) 108247739
chr17 28040931 28042400 TCF7L2 GTRD no Colon (HCT116) 108247740
chr17 28040956 28042371 ZNF274 GTRD no Bone Marrow (K562) 21749444
chr17 28040956 28042371 ZNF274 GTRD no Bone Marrow (K562) 108247749
chr17 28040956 28042371 ZNF274 GTRD no Bone Marrow (K562) 108247750
chr17 28040973 28042440 ZNF274 GTRD no Bone Marrow (K562) 21749451
chr17 28040973 28042440 ZNF274 GTRD no Bone Marrow (K562) 108247767
chr17 28040973 28042440 ZNF274 GTRD no Bone Marrow (K562) 108247768
chr17 28041027 28042453 ZNF274 GTRD no Blood (GM12878) 21749458
chr17 28041027 28042453 ZNF274 GTRD no Blood (GM12878) 108247786
chr17 28041027 28042453 ZNF274 GTRD no Blood (GM12878) 108247787
chr17 28041040 28042786 ZBTB33 GTRD no Lung (A549) 108247792
chr17 28041040 28042786 ZBTB33 GTRD no Lung (A549) 108247793
chr17 28041117 28042749 ZNF274 GTRD no Blood (GM12878) 21749474
chr17 28041117 28042749 ZNF274 GTRD no Blood (GM12878) 108247827
chr17 28041117 28042749 ZNF274 GTRD no Blood (GM12878) 108247828
chr17 28041134 28043020 ZNF274 GTRD no Cervix (HeLa-S3) 21749480
chr17 28041134 28043020 ZNF274 GTRD no Cervix (HeLa-S3) 108247841
chr17 28041134 28043020 ZNF274 GTRD no Cervix (HeLa-S3) 108247842
chr17 28041140 28042350 ZBTB33 GTRD no Lung (A549) 108247849
chr17 28041140 28042350 ZBTB33 GTRD no Lung (A549) 108247850
chr17 28041171 28042637 ZBTB33 GTRD no Lung (A549) 108247873
chr17 28041171 28042637 ZBTB33 GTRD no Lung (A549) 108247874
chr17 28041281 28042390 TCF7L2 GTRD no Colon (HCT116) 108247926
chr17 28041281 28042390 TCF7L2 GTRD no Colon (HCT116) 108247927
chr17 28041281 28043449 ZNF274 GTRD no Bone Marrow (K562) 21749508
chr17 28041281 28043449 ZNF274 GTRD no Bone Marrow (K562) 108247928
chr17 28041281 28043449 ZNF274 GTRD no Bone Marrow (K562) 108247929
chr17 28041307 28042709 ZNF274 GTRD no Bone Marrow (K562) 21749512
chr17 28041307 28042709 ZNF274 GTRD no Bone Marrow (K562) 108247937
chr17 28041307 28042709 ZNF274 GTRD no Bone Marrow (K562) 108247938
chr17 28041345 28042389 TCF7L2 GTRD no Colon (HCT116) 108247941
chr17 28041345 28042389 TCF7L2 GTRD no Colon (HCT116) 108247942
chr17 28041447 28042375 ZNF274 GTRD no Bone Marrow (K562) 21749530
chr17 28041447 28042375 ZNF274 GTRD no Bone Marrow (K562) 108247983
chr17 28041447 28042375 ZNF274 GTRD no Bone Marrow (K562) 108247984
chr17 28041475 28042432 TCF7L2 GTRD no Colon (HCT116) 108247998
chr17 28041479 28042477 TCF7L2 GTRD no Colon (HCT116) 108248003
chr17 28041670 28042358 ZNF274 GTRD no Blood (GM12878) 21749550
chr17 28041670 28042358 ZNF274 GTRD no Blood (GM12878) 108248018
chr17 28041719 28043099 ZNF274 GTRD no Bone Marrow (K562) 21749551
chr17 28041719 28043099 ZNF274 GTRD no Bone Marrow (K562) 108248020
chr17 28042330 28042344 TLX1 JASPAR yes 53752509
Genes associated with rs187920729[chr17:28042340], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More