EnhancerDB
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  3. rs188021412[chr1:39662401]
Enhancers that have rs188021412[chr1:39662401]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39647111 39665522 enh11761
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs188021412[chr1:39662401]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39661905 39662659 ZNF143 GTRD no Epithelial (MCF-7) 107802898
chr1 39662396 39662402 ZNF354C JASPAR yes 28266035
chr1 39662398 39662403 GATA2 JASPAR yes 28266036
chr1 39662399 39662413 ONECUT1 JASPAR yes 28266037
chr1 39662399 39662413 ONECUT2 JASPAR yes 28266038
Genes associated with rs188021412[chr1:39662401], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More