EnhancerDB
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  3. rs1880262[chr10:95228115]
Enhancers that have rs1880262[chr10:95228115]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 95216565 95237855 enh13412
Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs1880262[chr10:95228115]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 95228056 95228552 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21450998
chr10 95228056 95228552 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107932061
chr10 95228099 95228755 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107932062
chr10 95228110 95228119 ZEB1 JASPAR yes 129214422
chr10 95228111 95228121 FIGLA JASPAR yes 129214423
chr10 95228111 95228121 TCF4 JASPAR yes 129214424
chr10 95228113 95228118 USF2 TRANSFAC yes 129214425
Genes associated with rs1880262[chr10:95228115], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More