EnhancerDB
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  3. rs188052314[chr6:30812623]
Enhancers that have rs188052314[chr6:30812623]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs188052314[chr6:30812623]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30812605 30812626 IRF1 JASPAR yes 101058548
chr6 30812606 30812627 IRF1 JASPAR yes 101058549
chr6 30812612 30812627 FOXP1 JASPAR yes 101058550
chr6 30812612 30812627 MEF2C JASPAR yes 101058551
chr6 30812613 30812628 LEF1 JASPAR yes 101058552
chr6 30812614 30812628 GATA2 JASPAR yes 101058553
chr6 30812614 30812629 FOXP1 JASPAR yes 101058554
chr6 30812618 30812626 GATA3 JASPAR yes 101058555
Genes associated with rs188052314[chr6:30812623], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More