EnhancerDB
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  3. rs188058987[chr1:235162392]
Enhancers that have rs188058987[chr1:235162392]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235130325 235168235 enh997
Bone Marrow (K562) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs188058987[chr1:235162392]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235159909 235162647 ZNF274 GTRD no Bone Marrow (K562) 21403242
chr1 235159996 235162786 ZNF274 GTRD no Bone Marrow (K562) 21403244
chr1 235160076 235162496 ZNF274 GTRD no Liver (HepG2) 21403246
chr1 235160092 235162693 ZNF274 GTRD no Blood (GM12878) 21403248
chr1 235160359 235162808 ZNF274 GTRD no Blood (GM12878) 21403260
chr1 235160423 235162742 ZNF274 GTRD no Blood (GM12878) 21403267
chr1 235162180 235162500 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21403482
chr1 235162383 235162397 PLAG1 JASPAR yes 36344307
chr1 235162390 235162395 SP1 TRANSFAC yes 36344308
chr1 235162391 235162396 SP1 TRANSFAC yes 36344309
Genes associated with rs188058987[chr1:235162392], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More