EnhancerDB
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  3. rs188117405[chr12:125240702]
Enhancers that have rs188117405[chr12:125240702]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs188117405[chr12:125240702]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125239945 125240934 ZNF274 GTRD no Liver (HepG2) 21582865
chr12 125239945 125240934 ZNF274 GTRD no Liver (HepG2) 108069859
chr12 125240457 125241039 ZNF274 GTRD no Bone Marrow (K562) 21582868
chr12 125240529 125241049 ZNF274 GTRD no Bone Marrow (K562) 21582869
chr12 125240565 125241113 ZNF274 GTRD no Bone Marrow (K562) 21582870
chr12 125240628 125241034 ZNF274 GTRD no Bone Marrow (K562) 21582871
chr12 125240638 125241087 ZBTB33 GTRD no Lung (A549) 21582872
chr12 125240640 125240977 ZNF274 GTRD no Bone Marrow (K562) 21582873
chr12 125240662 125241049 ZNF274 GTRD no Liver (HepG2) 21582874
chr12 125240670 125240989 ZNF274 GTRD no Bone Marrow (K562) 21582875
chr12 125240686 125240702 POU4F2 JASPAR yes 124418279
chr12 125240686 125240702 POU4F3 JASPAR yes 124418280
chr12 125240687 125240702 FOXA1 JASPAR yes 124418282
chr12 125240688 125240702 POU4F1 JASPAR yes 124418284
chr12 125240688 125240703 FOXP1 JASPAR yes 124418285
chr12 125240688 125240703 HNF1A JASPAR yes 124418286
chr12 125240689 125240703 ONECUT2 JASPAR yes 124418288
chr12 125240689 125240703 ONECUT3 JASPAR yes 124418289
chr12 125240692 125240704 FOXI1 JASPAR yes 124418294
chr12 125240693 125240705 FOXC2 JASPAR yes 124418295
chr12 125240697 125241081 ZNF274 GTRD no Liver (HepG2) 21582876
chr12 125240699 125240703 YY1 TRANSFAC yes 124418297
chr12 125240701 125241025 ZNF274 GTRD no Bone Marrow (K562) 21582877
Genes associated with rs188117405[chr12:125240702], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More