EnhancerDB
  1. Home
  2. SNP
  3. rs188134618[chr5:159592730]
Enhancers that have rs188134618[chr5:159592730]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 159580425 159605208 enh22765
Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr5 159592617 159593055 vista49912
VISTA
Transcript factors that have rs188134618[chr5:159592730]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 159591962 159593679 POLR2A UCSC Txn Factor no Conserved 108537258
chr5 159591962 159593679 POLR2A UCSC Txn Factor no Conserved 108537259
chr5 159592590 159592951 MYC UCSC Txn Factor no Conserved 108537260
chr5 159592626 159593010 USF1 UCSC Txn Factor no Conserved 108537261
chr5 159592686 159592979 USF2 UCSC Txn Factor no Conserved 108537262
chr5 159592729 159592739 HMBOX1 JASPAR yes 67345235
chr5 159592729 159592739 HMBOX1 JASPAR yes 70751390
Genes associated with rs188134618[chr5:159592730], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More