EnhancerDB
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  3. rs188140606[chr1:27765187]
Enhancers that have rs188140606[chr1:27765187]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27742945 27784244 enh174
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs188140606[chr1:27765187]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27765175 27765187 NHLH1 JASPAR yes 27693914
chr1 27765178 27765187 ZEB1 JASPAR yes 27693918
chr1 27765178 27765190 ZBTB7A JASPAR yes 27693919
chr1 27765183 27765188 SP1 TRANSFAC yes 27693921
chr1 27765184 27765194 ETV6 JASPAR yes 27693922
chr1 27765184 27765195 ELK4 JASPAR yes 27693923
chr1 27765184 27765195 FLI1 JASPAR yes 27693924
chr1 27765186 27765192 ETS1 JASPAR yes 27693925
chr1 27765186 27765192 SPI1 JASPAR yes 27693926
Genes associated with rs188140606[chr1:27765187], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More