EnhancerDB
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  3. rs188143887[chr1:205265815]
Enhancers that have rs188143887[chr1:205265815]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205259785 205270135 enh12589
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs188143887[chr1:205265815]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205265747 205266622 TCF7L2 GTRD no Colon (HCT116) 21371695
chr1 205265772 205267510 TCF7L2 GTRD no Colon (HCT116) 21371696
chr1 205265803 205265815 FOXC2 JASPAR yes 34752869
chr1 205265803 205265817 ONECUT3 JASPAR yes 34752870
chr1 205265804 205265815 FOXB1 JASPAR yes 34752871
chr1 205265804 205265815 FOXC1 JASPAR yes 34752872
chr1 205265805 205265820 FOXA1 JASPAR yes 34752874
chr1 205265806 205265818 FOXI1 JASPAR yes 34752875
chr1 205265806 205265821 FOXP1 JASPAR yes 34752876
chr1 205265807 205265819 FOXC2 JASPAR yes 34752877
chr1 205265807 205265821 ONECUT2 JASPAR yes 34752878
chr1 205265807 205265821 ONECUT3 JASPAR yes 34752879
chr1 205265808 205265819 FOXB1 JASPAR yes 34752880
chr1 205265808 205265819 FOXC1 JASPAR yes 34752881
chr1 205265811 205265823 MEF2D JASPAR yes 34752883
chr1 205265813 205265817 YY1 TRANSFAC yes 34752884
Genes associated with rs188143887[chr1:205265815], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More