EnhancerDB
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  3. rs188189499[chr7:2860196]
Enhancers that have rs188189499[chr7:2860196]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr7 2838125 2881021 enh23934
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr7 2860040 2860490 vista54902
VISTA
Transcript factors that have rs188189499[chr7:2860196]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr7 2860094 2860494 FOS UCSC Txn Factor no Conserved 108543073
chr7 2860192 2860198 TBP TRANSFAC yes 12562472
chr7 2860192 2860198 TBP TRANSFAC yes 26017093
chr7 2860195 2860207 IRF1 JASPAR yes 12562473
chr7 2860195 2860207 IRF1 JASPAR yes 26017094
chr7 2860196 2860217 IRF1 JASPAR yes 12562474
chr7 2860196 2860217 IRF1 JASPAR yes 26017095
Genes associated with rs188189499[chr7:2860196], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More