EnhancerDB
  1. Home
  2. SNP
  3. rs188215054[chr1:25095109]
Enhancers that have rs188215054[chr1:25095109]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25085286 25108435 enh141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Blood (Karpas-422) Uterus Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs188215054[chr1:25095109]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25094820 25096310 ZNF274 GTRD no Blood (GM12878) 107802466
chr1 25095102 25095117 HNF1A JASPAR yes 27529298
chr1 25095103 25095116 HNF1B JASPAR yes 27529299
chr1 25095108 25095120 POU3F1 JASPAR yes 27529300
chr1 25095108 25095120 POU3F2 JASPAR yes 27529301
chr1 25095109 25095113 YY1 TRANSFAC yes 27529302
Genes associated with rs188215054[chr1:25095109], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More