EnhancerDB
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  3. rs188241553[chr17:49003533]
Enhancers that have rs188241553[chr17:49003533]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48974385 49015197 enh4464
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs188241553[chr17:49003533]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48989629 49003712 ZBTB33 GTRD no Lung (A549) 108271465
chr17 48989629 49003712 ZBTB33 GTRD no Lung (A549) 108271466
chr17 48989629 49003712 ZBTB33 GTRD no Lung (A549) 108271467
chr17 48994501 49004321 ZNF274 GTRD no Bone Marrow (K562) 21770758
chr17 48994501 49004321 ZNF274 GTRD no Bone Marrow (K562) 108271537
chr17 48994501 49004321 ZNF274 GTRD no Bone Marrow (K562) 108271538
chr17 48994501 49004321 ZNF274 GTRD no Bone Marrow (K562) 108271539
chr17 49002618 49005920 ZNF274 GTRD no Bone Marrow (K562) 21771051
chr17 49002960 49005849 ZNF274 GTRD no Liver (HepG2) 21771053
chr17 49003276 49004180 ZNF274 GTRD no Liver (HepG2) 21771054
chr17 49003375 49004110 ZNF274 GTRD no Liver (HepG2) 21771055
chr17 49003382 49004371 ZNF274 GTRD no Liver (HepG2) 21771056
chr17 49003454 49004331 ZNF274 GTRD no Liver (HepG2) 21771057
chr17 49003481 49004225 ZNF274 GTRD no Bone Marrow (K562) 21771058
chr17 49003485 49004545 ZNF274 GTRD no Bone Marrow (K562) 21771059
chr17 49003513 49003533 RREB1 JASPAR yes 54734946
chr17 49003527 49003537 TBX21 JASPAR yes 54734951
chr17 49003527 49003538 TBX20 JASPAR yes 54734952
chr17 49003527 49003538 TBX2 JASPAR yes 54734953
chr17 49003527 49003540 EOMES JASPAR yes 54734954
chr17 49003528 49003536 MGA JASPAR yes 54734955
chr17 49003528 49003536 TBX15 JASPAR yes 54734956
chr17 49003528 49003536 TBX1 JASPAR yes 54734957
chr17 49003528 49003536 TBX4 JASPAR yes 54734958
chr17 49003528 49003536 TBX5 JASPAR yes 54734959
chr17 49003528 49003538 TBR1 JASPAR yes 54734960
Genes associated with rs188241553[chr17:49003533], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More