EnhancerDB
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  3. rs188249769[chr5:172267886]
Enhancers that have rs188249769[chr5:172267886]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs188249769[chr5:172267886]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172267884 172267896 PBX1 JASPAR yes 67833146
chr5 172267885 172267898 DUXA JASPAR yes 67833147
chr5 172267885 172267899 ONECUT1 JASPAR yes 67833148
chr5 172267885 172267899 ONECUT2 JASPAR yes 67833149
chr5 172267885 172267899 ONECUT3 JASPAR yes 67833150
chr5 172267886 172267896 PAX3 JASPAR yes 67833151
chr5 172267886 172267896 PAX7 JASPAR yes 67833152
chr5 172267886 172267897 DUX4 JASPAR yes 67833153
Genes associated with rs188249769[chr5:172267886], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More