EnhancerDB
  1. Home
  2. SNP
  3. rs188268949[chr1:224025552]
Enhancers that have rs188268949[chr1:224025552]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224017164 224031755 enh12713
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
chr1 224025511 224025803 vista5284
VISTA
Transcript factors that have rs188268949[chr1:224025552]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224025547 224025554 E2F1 TRANSFAC yes 35678623
chr1 224025547 224025554 E2F1 TRANSFAC yes 118467580
chr1 224025547 224025555 E2F1 JASPAR yes 35678624
chr1 224025547 224025555 E2F1 JASPAR yes 118467581
Genes associated with rs188268949[chr1:224025552], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More