EnhancerDB
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  3. rs188271169[chr1:227543344]
Enhancers that have rs188271169[chr1:227543344]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 227541685 227548089 enh12732
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Astrocyte Lung (A549) Stomach Placenta Adrenal Uterus Lung (PC-9) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs188271169[chr1:227543344]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 227541781 227543359 ZNF143 GTRD no Epithelial (MCF-7) 21387791
chr1 227542055 227543387 ZBTB33 GTRD no Lung (A549) 21387797
chr1 227542092 227543471 ZBTB33 GTRD no Lung (A549) 21387803
chr1 227542190 227543350 ZBTB33 GTRD no Lung (A549) 21387821
chr1 227542276 227543441 ZBTB33 GTRD no Lung (A549) 21387828
chr1 227542420 227543419 ZNF274 GTRD no Cervix (HeLa-S3) 21387849
chr1 227543264 227543588 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21387879
chr1 227543295 227543551 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21387880
chr1 227543336 227543351 TFAP2A JASPAR yes 35871789
chr1 227543340 227543349 TFAP2A JASPAR yes 35871790
chr1 227543344 227543349 SP1 TRANSFAC yes 35871791
Genes associated with rs188271169[chr1:227543344], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More