EnhancerDB
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  3. rs188321852[chr1:24626385]
Enhancers that have rs188321852[chr1:24626385]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24599645 24630859 enh11619
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs188321852[chr1:24626385]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24626381 24626391 TBX21 JASPAR yes 27498117
chr1 24626381 24626392 TBX20 JASPAR yes 27498118
chr1 24626381 24626392 TBX2 JASPAR yes 27498119
chr1 24626381 24626394 EOMES JASPAR yes 27498120
chr1 24626382 24626390 MGA JASPAR yes 27498121
chr1 24626382 24626390 TBX15 JASPAR yes 27498122
chr1 24626382 24626390 TBX1 JASPAR yes 27498123
chr1 24626382 24626390 TBX4 JASPAR yes 27498124
chr1 24626382 24626390 TBX5 JASPAR yes 27498125
chr1 24626382 24626392 TBR1 JASPAR yes 27498126
Genes associated with rs188321852[chr1:24626385], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More