EnhancerDB
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  3. rs188338183[chr6:30801760]
Enhancers that have rs188338183[chr6:30801760]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs188338183[chr6:30801760]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30801751 30801762 FOSL2 JASPAR yes 101056910
chr6 30801753 30801766 SMAD2 JASPAR yes 101056911
chr6 30801756 30801766 TBR1 JASPAR yes 101056912
chr6 30801757 30801767 TBX21 JASPAR yes 101056913
chr6 30801758 30801766 MGA JASPAR yes 101056914
chr6 30801758 30801766 TBX15 JASPAR yes 101056915
chr6 30801758 30801766 TBX1 JASPAR yes 101056916
chr6 30801758 30801766 TBX4 JASPAR yes 101056917
chr6 30801758 30801766 TBX5 JASPAR yes 101056918
chr6 30801758 30801767 ZEB1 JASPAR yes 101056919
chr6 30801758 30801770 PKNOX1 JASPAR yes 101056920
chr6 30801758 30801770 TGIF1 JASPAR yes 101056921
chr6 30801758 30801771 ZBTB18 JASPAR yes 101056922
chr6 30801759 30801769 FIGLA JASPAR yes 101056923
chr6 30801759 30801769 ID4 JASPAR yes 101056924
chr6 30801759 30801769 TCF3 JASPAR yes 101056925
chr6 30801759 30801769 TCF4 JASPAR yes 101056926
chr6 30801760 30801769 SNAI2 JASPAR yes 101056927
Genes associated with rs188338183[chr6:30801760], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More