EnhancerDB
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  3. rs188353596[chr17:46078602]
Enhancers that have rs188353596[chr17:46078602]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 46058151 46084696 enh4448
Liver Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs188353596[chr17:46078602]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 46076849 46078867 ZNF274 GTRD no Bone Marrow (K562) 108267648
chr17 46077712 46078793 ZNF274 GTRD no Bone Marrow (K562) 108267649
chr17 46078090 46079275 ZNF274 GTRD no Bone Marrow (K562) 108267650
chr17 46078128 46079177 ZNF274 GTRD no Bone Marrow (K562) 108267651
chr17 46078165 46079007 ZNF274 GTRD no Bone Marrow (K562) 108267652
chr17 46078202 46079518 ZNF274 GTRD no Bone Marrow (K562) 108267653
chr17 46078215 46078811 ZNF274 GTRD no Bone Marrow (K562) 108267654
chr17 46078217 46078811 ZNF274 GTRD no Bone Marrow (K562) 108267655
chr17 46078227 46079227 ZNF274 GTRD no Bone Marrow (K562) 108267656
chr17 46078285 46078746 ZNF274 GTRD no Bone Marrow (K562) 108267657
chr17 46078385 46079331 ZNF274 GTRD no Bone Marrow (K562) 108267658
chr17 46078405 46079050 ZNF274 GTRD no Bone Marrow (K562) 108267659
chr17 46078451 46079246 ZNF274 GTRD no Bone Marrow (K562) 108267660
chr17 46078516 46079243 ZNF274 GTRD no Bone Marrow (K562) 108267661
chr17 46078530 46079200 ZNF274 GTRD no Bone Marrow (K562) 108267662
chr17 46078552 46079180 ZNF274 GTRD no Bone Marrow (K562) 108267663
chr17 46078554 46079082 ZNF274 GTRD no Bone Marrow (K562) 108267664
chr17 46078594 46078604 SP1 JASPAR yes 54551374
chr17 46078600 46078610 SMAD3 JASPAR yes 54551375
Genes associated with rs188353596[chr17:46078602], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More