EnhancerDB
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  3. rs188380848[chr1:41878402]
Enhancers that have rs188380848[chr1:41878402]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41849805 41888800 enh11788
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs188380848[chr1:41878402]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41878394 41878402 MEIS3 JASPAR yes 28387087
chr1 41878400 41878411 E2F6 JASPAR yes 28387088
chr1 41878400 41878414 PLAG1 JASPAR yes 28387089
chr1 41878401 41878406 SP1 TRANSFAC yes 28387090
chr1 41878402 41878412 SP1 JASPAR yes 28387091
Genes associated with rs188380848[chr1:41878402], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More