EnhancerDB
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  3. rs188478573[chr6:42285050]
Enhancers that have rs188478573[chr6:42285050]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42275585 42296471 enh9113
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Ovary Bone (Osteoblast) Lung (A549) Stomach Colon (HCT116) Uterus Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs188478573[chr6:42285050]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42285042 42285052 EVX1 JASPAR yes 101708072
chr6 42285042 42285052 HOXA2 JASPAR yes 101708073
chr6 42285042 42285052 MEOX1 JASPAR yes 101708074
chr6 42285042 42285052 MEOX2 JASPAR yes 101708075
chr6 42285042 42285052 MNX1 JASPAR yes 101708076
chr6 42285048 42285069 MAFG JASPAR yes 101708077
Genes associated with rs188478573[chr6:42285050], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More