EnhancerDB
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  3. rs188524052[chr12:116961388]
Enhancers that have rs188524052[chr12:116961388]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 116953469 116985255 enh30011
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs188524052[chr12:116961388]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 116960903 116961570 TCF7L2 GTRD no Colon (HCT116) 21577227
chr12 116961018 116961504 TCF7L2 GTRD no Colon (HCT116) 21577228
Genes associated with rs188524052[chr12:116961388], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More