EnhancerDB
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  3. rs188557727[chr6:16332557]
Enhancers that have rs188557727[chr6:16332557]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16329544 16348350 enh8975
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs188557727[chr6:16332557]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16332554 16332558 NFE TRANSFAC yes 100288336
chr6 16332556 16332566 SREBF1 JASPAR yes 100288337
chr6 16332556 16332566 SREBF2 JASPAR yes 100288338
Genes associated with rs188557727[chr6:16332557], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More