EnhancerDB
  1. Home
  2. SNP
  3. rs188672871[chr1:27743679]
Enhancers that have rs188672871[chr1:27743679]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27742945 27784244 enh174
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs188672871[chr1:27743679]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27743671 27743683 FOXC2 JASPAR yes 27691273
chr1 27743671 27743685 FOXF2 JASPAR yes 27691274
chr1 27743672 27743680 FOXG1 JASPAR yes 27691275
chr1 27743672 27743680 FOXO3 JASPAR yes 27691276
Genes associated with rs188672871[chr1:27743679], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More