EnhancerDB
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  3. rs188707658[chr16:85249366]
Enhancers that have rs188707658[chr16:85249366]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs188707658[chr16:85249366]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85248672 85250583 ZNF143 GTRD no Epithelial (MCF-7) 21721352
chr16 85248684 85250600 TCF7L2 GTRD no Colon (HCT116) 21721353
chr16 85249128 85249418 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21721354
chr16 85249154 85250613 TCF7L2 GTRD no Colon (HCT116) 21721355
chr16 85249243 85250534 TCF7L2 GTRD no Colon (HCT116) 21721356
chr16 85249358 85249368 ZNF740 JASPAR yes 12033757
chr16 85249360 85249370 SP1 JASPAR yes 12033758
chr16 85249360 85249370 ZNF740 JASPAR yes 12033759
chr16 85249363 85249373 TBX21 JASPAR yes 12033760
chr16 85249363 85249376 EOMES JASPAR yes 12033761
chr16 85249364 85249372 MGA JASPAR yes 12033762
chr16 85249364 85249372 TBX15 JASPAR yes 12033763
chr16 85249364 85249372 TBX1 JASPAR yes 12033764
chr16 85249364 85249372 TBX4 JASPAR yes 12033765
chr16 85249364 85249372 TBX5 JASPAR yes 12033766
Genes associated with rs188707658[chr16:85249366], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More