EnhancerDB
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  3. rs188717229[chr1:168465166]
Enhancers that have rs188717229[chr1:168465166]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 168433465 168471139 enh12354
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs188717229[chr1:168465166]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 168464646 168465210 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21348401
chr1 168464647 168465263 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21348402
chr1 168464706 168465250 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21348403
chr1 168464790 168465246 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21348404
chr1 168465154 168465166 IRF1 JASPAR yes 32932511
Genes associated with rs188717229[chr1:168465166], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More