EnhancerDB
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  3. rs188725790[chr1:1796894]
Enhancers that have rs188725790[chr1:1796894]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 1770710 1799155 enh6
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs188725790[chr1:1796894]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1796890 1796895 SP1 TRANSFAC yes 26208877
chr1 1796890 1796899 HIC2 JASPAR yes 26208878
chr1 1796893 1796897 LFA1 TRANSFAC yes 26208879
chr1 1796894 1796904 ID4 JASPAR yes 26208880
chr1 1796894 1796904 TCF3 JASPAR yes 26208881
chr1 1796894 1796904 TCF4 JASPAR yes 26208882
Genes associated with rs188725790[chr1:1796894], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More