EnhancerDB
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  3. rs188727459[chr1:19770486]
Enhancers that have rs188727459[chr1:19770486]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs188727459[chr1:19770486]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19770484 19770499 MEF2C JASPAR yes 27190994
chr1 19770485 19770500 MEF2A JASPAR yes 27190995
chr1 19770486 19770498 MEF2A JASPAR yes 27190996
chr1 19770486 19770498 MEF2B JASPAR yes 27190997
chr1 19770486 19770498 MEF2D JASPAR yes 27190998
Genes associated with rs188727459[chr1:19770486], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More