EnhancerDB
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  3. rs188731725[chr1:8493481]
Enhancers that have rs188731725[chr1:8493481]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8427225 8493496 enh42
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs188731725[chr1:8493481]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8493467 8493487 TP53 JASPAR yes 26553500
chr1 8493468 8493483 TP53 JASPAR yes 26553501
chr1 8493475 8493487 HES5 JASPAR yes 26553502
chr1 8493475 8493487 PKNOX1 JASPAR yes 26553503
chr1 8493475 8493487 PKNOX2 JASPAR yes 26553504
chr1 8493475 8493487 TGIF2 JASPAR yes 26553505
chr1 8493476 8493486 CLOCK JASPAR yes 26553506
chr1 8493476 8493486 NEUROG2 JASPAR yes 26553507
chr1 8493477 8493487 MAX JASPAR yes 26553508
Genes associated with rs188731725[chr1:8493481], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More