EnhancerDB
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  3. rs188767789[chr6:44023197]
Enhancers that have rs188767789[chr6:44023197]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43975688 44057369 enh9138
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs188767789[chr6:44023197]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 44022719 44023341 TFAP2C UCSC Txn Factor no Conserved 108540381
chr6 44022720 44023348 TFAP2A UCSC Txn Factor no Conserved 108540382
chr6 44023187 44023197 POU6F2 JASPAR yes 101818293
chr6 44023191 44023205 NR2F1 JASPAR yes 101818294
Genes associated with rs188767789[chr6:44023197], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More