EnhancerDB
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  3. rs188792029[chr1:8775311]
Enhancers that have rs188792029[chr1:8775311]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8756385 8790235 enh11474
Brain (SK-N-MC) Astrocyte Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs188792029[chr1:8775311]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8775299 8775312 SMAD2 JASPAR yes 26590486
chr1 8775302 8775312 TBR1 JASPAR yes 26590487
chr1 8775303 8775313 TBX21 JASPAR yes 26590488
chr1 8775304 8775312 MGA JASPAR yes 26590489
chr1 8775304 8775312 TBX15 JASPAR yes 26590490
chr1 8775304 8775312 TBX1 JASPAR yes 26590491
chr1 8775304 8775312 TBX4 JASPAR yes 26590492
chr1 8775304 8775312 TBX5 JASPAR yes 26590493
chr1 8775304 8775313 ZEB1 JASPAR yes 26590494
chr1 8775304 8775316 PKNOX1 JASPAR yes 26590495
chr1 8775304 8775316 TGIF1 JASPAR yes 26590496
chr1 8775304 8775317 ZBTB18 JASPAR yes 26590497
chr1 8775305 8775315 FIGLA JASPAR yes 26590498
chr1 8775305 8775315 ID4 JASPAR yes 26590499
chr1 8775305 8775315 TCF3 JASPAR yes 26590500
chr1 8775305 8775315 TCF4 JASPAR yes 26590501
chr1 8775306 8775315 SNAI2 JASPAR yes 26590502
chr1 8775307 8775312 USF2 TRANSFAC yes 26590503
Genes associated with rs188792029[chr1:8775311], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More