EnhancerDB
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  3. rs188806314[chr16:85246843]
Enhancers that have rs188806314[chr16:85246843]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs188806314[chr16:85246843]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85245155 85246844 ZNF274 GTRD no Bone Marrow (K562) 21721219
chr16 85245178 85247005 ZNF274 GTRD no Bone Marrow (K562) 21721222
chr16 85245458 85247432 ZNF274 GTRD no Blood (GM12878) 21721259
chr16 85245584 85246918 ZNF274 GTRD no Bone Marrow (K562) 21721275
chr16 85245623 85247015 ZNF143 GTRD no Epithelial (MCF-7) 21721286
chr16 85245680 85247063 ZNF143 GTRD no Epithelial (MCF-7) 21721306
chr16 85246350 85246957 TCF7L2 GTRD no Colon (HCT116) 21721331
chr16 85246384 85248347 TCF7L2 GTRD no Colon (HCT116) 21721335
chr16 85246445 85247120 TCF7L2 GTRD no Colon (HCT116) 21721336
chr16 85246448 85247703 TCF7L2 GTRD no Colon (HCT116) 21721337
chr16 85246530 85246912 ZNF143 GTRD no Epithelial (MCF-7) 21721338
chr16 85246841 85246860 RFX2 JASPAR yes 12033418
chr16 85246843 85246858 RFX5 JASPAR yes 12033419
Genes associated with rs188806314[chr16:85246843], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More