EnhancerDB
  1. Home
  2. SNP
  3. rs188828534[chr10:21639495]
Enhancers that have rs188828534[chr10:21639495]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 21636765 21666075 enh13040
Bone Marrow (K562) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs188828534[chr10:21639495]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 21638943 21639631 ZNF143 GTRD no Epithelial (MCF-7) 21420973
chr10 21639001 21639577 ZNF143 GTRD no Epithelial (MCF-7) 21420974
chr10 21639107 21639496 ZNF274 GTRD no Bone Marrow (K562) 21420976
chr10 21639140 21639543 ZNF143 GTRD no Epithelial (MCF-7) 21420977
chr10 21639154 21639624 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21420978
chr10 21639155 21639511 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21420979
chr10 21639240 21639836 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21420982
chr10 21639321 21639791 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21420983
chr10 21639492 21639504 E2F8 JASPAR yes 125899851
Genes associated with rs188828534[chr10:21639495], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More