EnhancerDB
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  3. rs188872742[chr5:77797304]
Enhancers that have rs188872742[chr5:77797304]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77784972 77817655 enh8511
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
chr5 77797282 77797316 vista48135
VISTA
Transcript factors that have rs188872742[chr5:77797304]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77797302 77797317 STAT1 JASPAR yes 63593260
chr5 77797302 77797317 STAT1 JASPAR yes 70667982
chr5 77797304 77797315 STAT1 JASPAR yes 63593261
chr5 77797304 77797315 STAT3 JASPAR yes 63593262
chr5 77797304 77797315 STAT1 JASPAR yes 70667983
chr5 77797304 77797315 STAT3 JASPAR yes 70667984
Genes associated with rs188872742[chr5:77797304], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More