EnhancerDB
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  3. rs189001628[chr1:1773641]
Enhancers that have rs189001628[chr1:1773641]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 1770710 1799155 enh6
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs189001628[chr1:1773641]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1773629 1773643 PLAG1 JASPAR yes 26205479
chr1 1773636 1773641 SP1 TRANSFAC yes 26205480
chr1 1773637 1773642 SP1 TRANSFAC yes 26205481
chr1 1773637 1773646 THAP1 JASPAR yes 26205482
chr1 1773640 1773644 LFA1 TRANSFAC yes 26205483
Genes associated with rs189001628[chr1:1773641], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More