EnhancerDB
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  3. rs189054142[chr1:205265120]
Enhancers that have rs189054142[chr1:205265120]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205259785 205270135 enh12589
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs189054142[chr1:205265120]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205264664 205265320 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107861705
chr1 205264752 205265268 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21371693
chr1 205264752 205265268 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107861706
chr1 205264867 205265483 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107861707
chr1 205264937 205265437 ZNF274 GTRD no Blood (GM12878) 107861708
chr1 205264944 205265284 TCF7L2 GTRD no Colon (HCT116) 21371694
chr1 205264944 205265284 TCF7L2 GTRD no Colon (HCT116) 107861709
Genes associated with rs189054142[chr1:205265120], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More