EnhancerDB
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  3. rs189090905[chr6:47054480]
Enhancers that have rs189090905[chr6:47054480]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 47048805 47068805 enh23286
Liver Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung
Transcript factors that have rs189090905[chr6:47054480]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 47054473 47054482 PITX3 JASPAR yes 101995650
chr6 47054473 47054483 GSC2 JASPAR yes 101995651
chr6 47054473 47054483 GSC JASPAR yes 101995652
chr6 47054474 47054482 OTX2 JASPAR yes 101995653
Genes associated with rs189090905[chr6:47054480], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More